Executive Summary
This paper makes one argument: biodiversity loss and the degradation of the services nature provides are two descriptions of a single process, and current assessment practice captures only the first. We count what lives in an ecosystem. We rarely measure what it does, or what that is worth, even though the benefits a living system provides are predictable and can be measured when the assessment is built to look for them.
The stakes are highest at the coast. The ocean economy generates around $2.6 trillion a year and supports more than 100 million jobs (OECD, 2025), and coastal and marine ecosystems deliver a share of the world's ecosystem-service value far beyond their area, with coral reefs and coastal wetlands among the highest-value habitats on Earth (Costanza et al., 2014). Yet the indicators used to track that value do not translate into the language of risk, dependency, and return in which investment and policy decisions are made (TNFD, 2023; WEF, 2020). What has been missing is not the science but the will to apply it as standard, at a moment when policy and finance are, for the first time, demanding exactly this kind of evidence.
The paper sets out the logic connecting biodiversity to the services it underpins, reviews the evidence that service decline follows biodiversity loss in measurable and repeatable ways, and locates the approach within the EU policy and disclosure frameworks now taking effect. It closes by showing how measurement turns ecological recovery into value that can be reported and acted on, the point at which protecting and rebuilding nature becomes a decision an economy can make in its own terms.
biodiversity loss and the degradation of the services nature provides are two descriptions of a single process, and current assessment practice captures only the first.
We should measure what ecosystems do, not only what lives in them.
service degradation follows biodiversity loss in measurable, repeatable ways, and where biodiversity is rebuilt, services return.
The ocean economy generates around $2.6 trillion a year and supports more than 100 million jobs
The Nature Restoration Regulation, the EU Biodiversity Strategy for 2030, TNFD, and GRI 101 all now create specific demand for exactly this kind of integrated, service-based evidence.
An assessment is only as good as the data available to it, and the richest data comes from solutions built to generate it.
The gap between how nature is measured and how decisions are made
Nature is measured in one language and managed in another. Ecologists count species, while the people who decide how coastlines are built, how are licensed, and how capital is allocated weigh costs, risks, dependencies, and returns. Both accounts are accurate, but they do not translate into one another, and the distance between them is where the value of a functioning ecosystem tends to disappear before a decision is ever made.
A development can be approved on the strength of an environmental assessment that counted the species at a site but recorded almost nothing about what those species actually did for the people nearby, so the value about to be lost never enters the decision. Understanding why that gap persists, and why it has become urgent, means looking at how biodiversity is recorded today, how decisions are actually taken, and what is lost in the space between them.
The most common changes range from population reductions to global extinction caused by overexploitation or habitat loss. Global or regional losses of species are only the last steps of marine biodiversity decreases. Not all species decline in abundance because of human activities, highly invasive species can colonize new regions and eventually form monocultures. Although the arrival of new species may seem like an increase in species richness, the consequences for the local biodiversity are generally negative.
HOW BIODIVERSITY IS MEASURED TODAY
Conventional biodiversity metrics are dominated by composition, recording species counts, taxonomic richness, and abundance at a point in time. These measures are reasonable proxies for ecological health, and because they are and comparable across sites and over time, they have become the default, even though gathering them at sea is neither cheap nor simple. What they describe is what is present in a system rather than what it does. The functional processes that generate value for people, among them nutrient cycling, sediment filtration, the maintenance of water quality, and the provision of physical habitat, are largely absent from the standard ecological survey (Cardinale et al., 2012; Mace et al., 2012). A species list can stay reassuringly stable while the processes that depend on those species weaken beneath it.
The Millennium Ecosystem Assessment set out the conceptual link between ecosystem condition and human well-being two decades ago, introducing the distinction between provisioning, regulating, cultural, and supporting services that still the field (MEA, 2005).
Science is not the obstacle. Methods to measure what an ecosystem does have existed for decades; what has been missing is their routine use in the decisions that depend on them. The gap is one of practice, not knowledge.
HOW DECISIONS ARE MADE
The people who decide the fate of ecosystems rarely work from species lists. They work in the language of risk, dependency, and financial value.
A planning authority weighing a coastal scheme asks what natural flood protection it would remove. A lender or investor asks whether a business depends on natural resources that are running short, because if they are, the business is exposed. And a company must now to its regulators and to the market, how it depends on nature and how it affects it.
The EU Taxonomy, the Taskforce on Nature-related Financial Disclosures, and the Global Reporting Initiative's biodiversity standard all now call for nature to be reported in these terms (TNFD, 2023; GRI, 2024), and a species count cannot supply it. So the decisions still get made and the reports still get filed, but the data to hand cannot tell anyone what is actually at stake.
THE COST OF THE GAP BETWEEN MEASUREMENT AND DECISION
That mismatch is the mechanism through which biodiversity loss is systematically underpriced. When the unit of measurement is the species and the unit of decision is value, the connection between ecological condition and material consequence stays out of view.
The decline that follows a loss, in water filtration, coastal protection, carbon storage, and fisheries, is left unquantified, and so absent from the calculations that govern investment and land and sea use. Economic modelling has linked continued biodiversity and ecosystem-service loss to damages in the order of trillions of dollars a year by mid-century (TEEB, 2010; WEF, 2020).
There is a further consequence in how loss is dealt with once it is . Where harm to nature is unavoidable, the established response is to compensate for it, often through offsetting that restores or protects habitat elsewhere, measured as no net loss against a baseline. That approach has its place, but it is loss-accounting by design, and it carries the same blind spot. A species count cannot show whether the gain claimed in one place genuinely replaces the function lost in another. As policy moves from compensating for loss towards requiring measurable gain, the ability to quantify what an ecosystem does, rather than only what lives in it, becomes the difference between a gain that can be demonstrated and one that can only be asserted.
Measuring what species do, not only their presence
Closing the gap calls for a common currency, a way of expressing biodiversity in terms that decision-makers already act on, without discarding the ecological detail that gives the measurement meaning. The approach rests on well-established ecosystem-services science, the cascade set out by the Millennium Ecosystem Assessment and developed through TEEB and functional ecology. What this paper adds is not a new instrument but the case for applying that science as standard, at the scale and decisions now demand, assembled into a single auditable chain from biodiversity to value rather than a closed or proprietary formula.
FROM WHO LIVES THERE, TO WHAT THEY DO, TO WHAT IT IS WORTH
The chain works across three connected layers.
- The first is composition: the species, functional groups, and structural habitat present in a system.
- The second is function: the ecological processes that composition drives, among them filtration, calcification, nutrient cycling, predation, and sediment .
- The third is service: the benefits that the function delivers to people, expressed in quantities that can be valued.
It is the move from the first layer to the second that conventional assessment tends to omit, and it is exactly that move which ties the condition of an ecosystem to the value at stake in its protection or its loss (Cardinale et al., 2012; Balvanera et al., 2014).
Functional biodiversity, meaning the range of ecological roles a community performs rather than the number of species it contains, is the variable that does the work. A community rich in species but poor in functional redundancy is more exposed to service loss when individual species disappear, because fewer roles are covered by more than one organism, while a community around diverse and overlapping functional groups holds its services even under partial degradation (Weiskopf et al., 2022).
For an assessor or a policymaker, this changes the question from how many species are present to what the community does and how reliably it does it. The second question can be answered in the language of risk and value; the first cannot. Integrated approaches of this kind increasingly bring biodiversity, function, and service into a single assessment chain rather than treating them as separate fields.
FOUR SERVICES THE FRAMEWORK CAN QUANTIFY
Four service categories anchor the approach, each both central to coastal and marine systems and material to the decisions made about them.
Water quality regulation
Water quality regulation covers the removal of nutrients and nitrogen, the mitigation of eutrophication, and the reduction of turbidity, work done by filter-feeding organisms, biofilm communities, and structurally complex living surfaces.
Carbon regulation
Carbon regulation covers the burial and long-term storage of carbon through biogenic pathways, including blue carbon in marine sediments and biocalcification in shell and reef structures.
Food production
Food production covers the fisheries’ enhancement and nursery functions that structurally complex habitats provide, particularly the reef and seagrass systems that carry commercial species through their early life stages.
Coastal protection
Coastal protection covers the wave attenuation, shoreline , and storm-surge buffering delivered by living structures as they grow.
Each can be quantified with peer-reviewed protocols, expressed in economic terms through natural-capital accounting, and tracked over time, which is what allows a biological parameter to be carried through to a figure a decision-maker .
ONE SQUARE , FROM SPECIES TO VALUE
To show how the chain operates, consider a single square of structurally complex, filter-feeding habitat of the kind that a hard surface in a productive coastal zone. The first step is composition, recording which organisms are present and, above all, the density of the filter feeders that do the work.
Each step after it is a conversion resting on an established rate. Because the rate at which these organisms filter water is well documented, the recorded density can be multiplied by a per-organism filtration rate to give the volume of water cleared each day. That daily volume, set against the nutrient load of the water, yields the mass of nitrogen removed over a year, in the units an engineer or a regulator already uses. A published reference price, for example, what treatment works would charge to remove the same nitrogen, then turns that quantity into an annual value, so the square of habitat can be stated in both ecological and monetary terms. The numbers in any real case depend on the site and the organisms and must be measured rather than assumed.
The point is that the hard part is the first measurement, and everything after it is a sequence of documented conversions, not a leap of faith. The same logic scales. Applied to a full deployment rather than a single square , it returns the figures a decision-maker actually works with: the volume of water cleared in a year, the of carbon buried, and the monetary value of each.
METHODOLOGICAL TRANSPARENCY
The credibility of an assessment of this kind rests on its method being open to inspection. The approach draws on internationally , peer-reviewed protocols so that its outputs are comparable across sites and jurisdictions and can be audited against disclosure requirements. It combines remote sensing with systematic field sampling to give biological measurements that are both broad in coverage and repeatable, and it treats monitoring as continuous and adaptive, so that protocols and recommendations are revised as evidence accumulates rather than fixed against a single ageing baseline.
Holding the whole together is natural-capital accounting, which frames an ecosystem as a productive asset whose degradation is a write-down of national or organisational wealth, consistent with the TEEB framework and the natural-capital approaches the European Commission has progressively adopted (TEEB, 2010; European Commission, 2020). This is a light methodological frame rather than a finished formula, and that is deliberate. It is built to be applied, tested, and improved in the open.
Service decline follows the biodiversity loss: the European evidence
The claim is simple, and the evidence backs it. Lose biodiversity and you lose the services it provides. The relationship runs in both directions, and where biodiversity is rebuilt, services return, often more fully than the starting conditions would suggest. Both can be measured.
This link has been documented across more than 500 peer-reviewed studies in terrestrial and marine systems under land and sea-use intensification (Ricketts et al., 2016). It is not always a straight line. Depending on the service and the system, loss can be gradual, exponential, or around thresholds that produce rapid collapse once crossed; some services fall in step with biodiversity, while others are held up by functional redundancy until a critical point gives way (Ross et al., 2021). Knowing which pattern applies is precisely what integrated assessment, rather than the species inventory, establish. Without it, managers and investors cannot see where the thresholds lie, and so cannot act before they are passed.
THE COLLAPSE OF EUROPE'S NATIVE OYSTER REEFS
The European native oyster, Ostrea edulis, is a well-documented case of service loss driven by the collapse of a foundational species. Its reefs once covered an estimated 1.75 million hectares across European seas, forming three-dimensional structures that filtered large volumes of water, sheltered fish and invertebrate communities, and gave the seabed much of its physical character (Thurstan et al., 2024). From the nineteenth century onwards, industrial fishing and dredging, compounded by declining water quality, introduced pests, and disease, reducing them until the habitat was functionally lost across European waters (zu Ermgassen et al., 2026).
What the record cannot tell us is what that loss was worth. Because those services were never measured in the terms this paper describes, the value Europe forfeited can only be estimated in hindsight, never stated with confidence, and that absence is the lesson. The collapse was recorded, as a species and a habitat gone, not as the filtration, the fisheries, and the coastal protection that went with them, a loss a composition-only assessment was never equipped to count.
SERVICES RETURN WHEN BIODIVERSITY IS REBUILT
The relationship is just as clear in reverse, and here the evidence is more encouraging. In European waters, native oyster reef restoration is now being pursued at the ecosystem scale, with early projects recovering reef structure together with the filtration, habitat, and biodiversity functions that come with it (zu Ermgassen et al., 2026). Meta-analysis of oyster reef restoration across many sites confirms that restored reefs deliver measurably greater filtration, fish production, and shoreline protection than degraded habitat (Smith et al., 2022).
In Wales, the Seagrass Ocean Rescue has re-established Zostera marina from seed at Dale Bay in Pembrokeshire, providing a peer-reviewed and scalable model for seagrass recovery in north-west European waters that is already being applied at further sites (Unsworth et al., 2019). In the coastal bays of Virginia, the reseeding of roughly 9,000 acres of eelgrass produced rapid and measurable recovery across several services at once, in fish and invertebrate abundance, water clarity, and the burial of carbon and nitrogen (Orth et al., 2020).
The scale of what is at stake is clearest in the blue-carbon record. Seagrasses cover less than 0.2% of the ocean floor yet account for around 10% of annual ocean carbon burial, and coastal blue-carbon systems are estimated to contribute on the order of US$190 billion a year in carbon value globally (Macreadie et al., 2021). In the Mediterranean, a natural-capital assessment of Posidonia oceanica meadows placed their per-area value among the highest of any ecosystem, driven by the combination of long-term carbon burial, water purification, and coastal protection (Vassallo et al., 2013). These are measured outputs of functioning communities, values that disappear when the community is lost and return, as the restoration record now shows, when it is rebuilt.
Taken together, the degradation and recovery cases establish the same bidirectional and quantifiable link: biodiversity loss drives service decline, and biodiversity recovery drives service return, in ways consistent enough and measurable enough to support decisions.
Regulation has caught up with the science
The case for service-based assessment is no longer only a scientific one. The regulatory and reporting environment has begun to ask for it directly. A series of EU instruments and global disclosure standards now requires to locate, measure, and report their dependencies and impacts on nature, which is the same evidence an integrated assessment produces. That alignment turns a methodological argument into a practical one, since adopting the approach is increasingly what compliance itself requires.
Three instruments do the decisive work, and this section takes each in turn. Behind them, the EU Biodiversity Strategy for 2030 sets the overall direction, committing the Union to integrate natural capital into public and private decisions, while at the international level, SDG 14 frames the marine dimension. Both point the same way, toward nature expressed as function and value.
THE EU NOW REQUIRES MEASURABLE GAIN, NOT JUST NO HARM
The Nature Restoration Regulation, in force since August 2024, stands apart in kind. Where disclosure standards ask organisations to measure and report, this is a binding law that requires outcomes, restoration measures across at least 20% of EU land and sea by 2030, rising to all ecosystems in need of restoration by 2050, and the return of at least 30% of habitats in poor condition to good condition by 2030 (European Commission, 2024). Member States must submit National Restoration Plans by September 2026, and those plans will have to show, through credible evidence, that restoration is delivering measurable gains in ecosystem function. It is a demand for ecological results rather than for reporting alone, and service-based assessment is the means of demonstrating them.
FINANCE NOW ASKS WHAT NATURE IS WORTH
The Taskforce on Nature-related Financial Disclosures provides the primary global framework for nature-related risk reporting. Its LEAP approach, directing organisations to locate, evaluate, assess, and prepare, together with its fourteen recommended disclosures, asks for dependencies and impacts to be quantified in terms that correspond directly to the outputs of service-based assessment (TNFD, 2023). Obligations expressed in terms of ecosystem condition and nature-related financial risk cannot be met by species data alone; the service metrics this approach generates are the evidence base that disclosure requires.
MANDATORY FROM 2026, AND A SPECIES LIST WILL NOT SATISFY IT
Effective from 1 January 2026, GRI 101 replaces GRI 304 with a standard covering full value-chain impacts, aligned with the Kunming-Montreal Global Biodiversity Framework and mapped to Sustainable Development Goals 14 and 15 (GRI, 2024). A published GRI and TNFD interoperability mapping lets organisations report against both on a common evidence base, which is what an integrated assessment, calibrated to produce service metrics alongside biodiversity indicators, is able to supply.
Where building is unavoidable, it can give back
Measuring the problem does not fix it; building differently does. The argument has a final step, which is intervention, and a particular condition attached to it. Where coastal and marine infrastructure has to be built, it can be designed to rebuild ecological function rather than remove it. The infrastructure that has replaced natural habitat, the seawalls, breakwaters, port structures, and platforms, has historically done so by substituting inert, simple surfaces for complex, living ones, with a net loss of function that compounds with each addition.
Much of that building is unavoidable. Ports will be expanded, shorelines defended, and energy built offshore, and each carries an ecological cost that no design removes entirely. The realistic question is not whether to build but how, and where a structure is going up, regardless, the case for making it give something back rather than nothing is straightforward, the more so now that the means to do so are readily available rather than experimental. Ecological engineering reverses the logic, treating built surfaces as opportunities for habitat rather than obstacles to it.
The relationship documented on natural reefs and seagrass beds does not stop at the edge of a built structure. The same colonising communities and the same filtration, habitat, and stabilising functions establish on a hard surface when it is designed to receive them, which is why a seawall or breakwater can recover function by the very mechanism the previous section described. The evidence for this is peer-reviewed and growing. Eco-engineered marine concrete designed with appropriate texture, porosity, and chemistry supports markedly higher invertebrate and fish abundance, richness, and diversity than standard designs, alongside a lower ratio of invasive to native species. EU-funded demonstration work, such as the Living Ports project, has shown the same effects at the scale of a working port (EU Living Ports project, CORDIS, 2023). These are recoveries of function, not cosmetic gains, and they can be quantified with the same approach used to document the original loss.
The significance is that a single intervention can produce both kinds of value at once, the ecological recovery this paper has described and the economic value that becomes legible once that recovery can be measured. These are not separate achievements but one achievement seen from two sides, and they are realised only when a solution is designed from the outset to be monitored. An assessment is only as good as the data available to it, and the richest data comes from solutions built to generate it.
It is here that measurable ecology becomes a financeable value. Once a benefit can be quantified and verified, it can be weighed, reported, and invested in like any other return, and the advantage lies with infrastructure that is not merely installed but engineered to produce the evidence of what it does.
What nature does should be the unit of decision
What this paper asks for is a single shift in practice. We should measure what ecosystems do, not only what lives in them. Doing so takes nothing away from the value of biodiversity in its own right. It adds to it, by connecting species and habitat to the services that communities and economies depend on, and by expressing that connection in terms that policy, finance, and planning can act on. The benefits of a living system are predictable, and they can be measured, and the evidence is now strong enough to treat that as a basis for decisions rather than as an aspiration.
That evidence is considerable. Across more than 500 peer-reviewed studies and a set of well-documented European and international cases, service degradation follows biodiversity loss in measurable, repeatable ways, and where biodiversity is rebuilt, services return. Policy and finance have caught up with the science. The Nature Restoration Regulation, the EU Biodiversity Strategy for 2030, TNFD, and GRI 101 all now create specific demand for exactly this kind of integrated, service-based evidence. The methodological tools to produce it, transparent, peer-reviewed, and adaptive, are available and in use.
Three steps follow, each for a different reader. For researchers, the priority is to extend the longitudinal evidence base for biodiversity and service relationships in coastal and marine systems, particularly in European waters, where restoration is now running at the ecosystem scale for the first time and offers a rare set of large-scale natural experiments. Their service-recovery data should be captured systematically, so that the evidence grows in step with the interventions.
For conservation organisations and the agencies preparing National Restoration Plans, service-based assessment is not an enhancement to existing methods but the foundation that the 2024 Regulation effectively requires, since plans will need to show recovery of function and not only the presence of species.
And for those who design, build, and assess the infrastructure that shapes coastal and marine environments, from shorelines and ports to offshore platforms, the same logic applies. Assessment delivers most when it is paired with solutions built to be measured, structures engineered from the outset to rebuild function and to generate the data that verifies it.
The science is settled enough to act on, the regulatory instruments are in place, and what remains is to make service-based, functionally grounded assessment the standard against which coastal and marine decisions are made and reported.
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